Package: kml3d 2.5.0

kml3d: K-Means for Joint Longitudinal Data

An implementation of k-means specifically design to cluster joint trajectories (longitudinal data on several variable-trajectories). Like 'kml', it provides facilities to deal with missing value, compute several quality criterion (Calinski and Harabatz, Ray and Turie, Davies and Bouldin, BIC,...) and propose a graphical interface for choosing the 'best' number of clusters. In addition, the 3D graph representing the mean joint-trajectories of each cluster can be exported through LaTeX in a 3D dynamic rotating PDF graph.

Authors:Christophe Genolini [cre, aut], Bruno Falissard [ctb], Patrice Kiener [ctb], Jean-Baptiste Pingault [ctb]

kml3d_2.5.0.tar.gz
kml3d_2.5.0.zip(r-4.5)kml3d_2.5.0.zip(r-4.4)kml3d_2.5.0.zip(r-4.3)
kml3d_2.5.0.tgz(r-4.4-any)kml3d_2.5.0.tgz(r-4.3-any)
kml3d_2.5.0.tar.gz(r-4.5-noble)kml3d_2.5.0.tar.gz(r-4.4-noble)
kml3d_2.5.0.tgz(r-4.4-emscripten)kml3d_2.5.0.tgz(r-4.3-emscripten)
kml3d.pdf |kml3d.html✨
kml3d/json (API)
NEWS

# Install 'kml3d' in R:
install.packages('kml3d', repos = c('https://christophe314.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • pregnandiol - ~ Pregnandiol measure (from QUIDEL database, René Écochard) ~

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.53 score 34 scripts 880 downloads 5 mentions 14 exports 36 dependencies

Last updated 1 months agofrom:a00002aaba. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 23 2024
R-4.5-winOKNov 23 2024
R-4.5-linuxOKNov 23 2024
R-4.4-winOKNov 23 2024
R-4.4-macOKNov 23 2024
R-4.3-winOKNov 23 2024
R-4.3-macOKNov 23 2024

Exports:affectIndiv3dcalculTrajMean3dcld3dclusterLongData3ddist3dgald3dgenerateArtificialLongData3dkml3dparKml3dplotplot3dplot3dPdfplotMeans3dplotTraj3d

Dependencies:base64encbslibcachemclasscliclusterclvdigestevaluatefastmapfontawesomefsgluehighrhtmltoolshtmlwidgetsjquerylibjsonlitekmlknitrlifecyclelongitudinalDatamagrittrMASSmemoisemimemisc3dR6rappdirsrglrlangrmarkdownsasstinytexxfunyaml

Readme and manuals

Help Manual

Help pageTopics
~ Overview: KmL3D, K-means for joint Longitudinal data ~kml3d-package [,ParChoice-method [<-,ParChoice-method
~ Function: affectIndiv3d ~affectIndiv3d
~ Function: calculTrajMean3d ~calculTrajMean3d
~ Function: clusterLongData3d (or cld3d) ~cld3d clusterLongData3d clusterLongData3d,ANY,ANY,ANY,ANY,ANY,ANY clusterLongData3d,ANY,ANY,ANY,ANY,ANY,ANY-method clusterLongData3d,missing,missing,missing,missing,missing,missing clusterLongData3d,missing,missing,missing,missing,missing,missing-method
~ Class: ClusterLongData3d ~ClusterLongData3d-class show,ClusterLongData3d-method [,ClusterLongData3d,ANY,missing-method [,ClusterLongData3d-method [<-,ClusterLongData3d,character,missing,missing-method [<-,ClusterLongData3d-method
~ Function: dist3d ~dist3d
~ Function: generateArtificialLongData3d (or gald3d) ~gald3d generateArtificialLongData3d
~ Algorithm kml3d: K-means for Joint Longitidinal data ~kml3d kml3d,ClusterLongData-method kml3d-method
~ Function: parKml3d ~parKml3d
~ Function: plot for ClusterLongData3d ~plot plot,ClusterLongData3d plot,ClusterLongData3d,ANY-method plot,ClusterLongData3d,missing-method plot,ClusterLongData3d,numeric-method
~ Function: plot3d for ClusterLongData3d ~plot3d plot3d,ClusterLongData3d,missing-method plot3d,ClusterLongData3d,numeric-method
~ Function: plot3dPdf for ClusterLongData3d ~plot3dPdf plot3dPdf,ClusterLongData3d,missing-method plot3dPdf,ClusterLongData3d,numeric-method plot3dPdf,ClusterLongData3d-method
~ Function: plotMeans3d for ClusterLongData3d ~plotMeans3d plotMeans3d,ClusterLongData3d,numeric-method
~ Function: plotTraj3d for ClusterLongData3d ~plotTraj3d plotTraj3d,ClusterLongData3d,numeric-method
~ Pregnandiol measure (from QUIDEL database, René Écochard) ~pregnandiol